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New periplasmic conserved proteins, unique periplasmic proteins, and periplasmic proteins not previously annotated in  the genome of  A. ferrooxidans ATCC 23270 Conditions and sequence analysis were the same as in .

Journal: Molecular & cellular proteomics : MCP

Article Title: Periplasmic Proteins of the Extremophile Acidithiobacillus ferrooxidans

doi: 10.1074/mcp.M700042-MCP200

Figure Lengend Snippet: New periplasmic conserved proteins, unique periplasmic proteins, and periplasmic proteins not previously annotated in the genome of A. ferrooxidans ATCC 23270 Conditions and sequence analysis were the same as in .

Article Snippet: Unknown Proteins We found 28 proteins with export signals that were currently annotated as conserved hypothetical proteins, proteins containing domains of hypothetical proteins, or hypothetical proteins ( ). table ft1 table-wrap mode="anchored" t5 caption a7 AFE Function/similarity Score E value Molecular weight/pI Export signal No. unique peptides Sequence coverage % Hypothetical proteins 136 Conserved hypothetical protein 63.2/9.78 Sec 4 8 163 Conserved hypothetical protein 59.6/9.4 Sec 3 7 278 Conserved hypothetical protein 23.9/9.04 Sec 1 4 981 Conserved hypothetical protein 24.2/8.92 Sec 6 29 2570 Conserved hypothetical protein 27.4/9.98 SecP 2 11 2954 Conserved hypothetical protein 28.9/8.91 Sec 3 14 3181 Conserved hypothetical protein 19.9/8.54 Sec 6 42 1060 Conserved domain protein 39.3/7.29 Sec 12 47 1061 Conserved domain protein 10.8/5.66 Sec 7 63 2507 Conserved domain protein 28/8.04 SecP 1 4 2910 Conserved domain protein 52.2/9.31 Sec 2 6 157 Hypothetical protein 31.3/10.79 Sec 3 11 292 Hypothetical protein 15.5/9.3 Sec 8 54 457 Hypothetical protein 15.4/9.74 Sec 6 52 610 Hypothetical protein 10.9/12.24 Sec 3 31 826 Hypothetical protein 17.8/9.72 Sec 3 25 1110 Hypothetical protein 16.1/10 Sec 4 20 2111 Hypothetical protein 21.4/9.94 Sec 4 25 2167 Hypothetical protein 25.4/9.88 SecP 3 15 2418 Hypothetical protein 27.9/9.55 Sec 1 4 2429 Hypothetical protein 46.3/9.04 Sec 7 21 2434 Hypothetical protein 44.5/8.78 Sec 2 7 2770 Hypothetical protein 19.9/5.04 Sec 2 14 2928 Hypothetical protein 14.8/7.8 Sec 3 32 2994 Hypothetical protein 49.8/9.1 Sec 13 44 3060 Hypothetical protein 20.3/10.14 Sec 3 25 3099 Hypothetical protein 21.3/8.56 Sec 3 18 3197 Hypothetical protein 14.5/9.48 Sec 8 50 ORFs not annotated by TIGR Copper resistance protein CopC (Burkholderia sp. 383) 85.9 4 e –16 13.5/10.17 Sec 4 45 Putative sterol carrier protein ( T. denitrificans ATCC 25259) 120 3 e –26 20.5/9.4 Sec 1 10 Cytochrome c , class I ( Anaeromyxobacter dehalogenans 2CP-C) 74.3 5 e –12 32.2/9.99 SecP 12 31 Hypothetical protein 15.4/7.25 Sec 3 33 Hypothetical protein 10.4/9.43 Sec 1 11 Hypothetical protein 15.3/10.28 Sec 4 30 Hypothetical protein 16.8/9.33 Sec 9 69 Open in a separate window caption a8 New periplasmic conserved proteins, unique periplasmic proteins, and periplasmic proteins not previously annotated in the genome of A. ferrooxidans ATCC 23270 Conditions and sequence analysis were the same as in .

Techniques: Sequencing